Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHMP2AO43633 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHMP2AO43633 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP2AO43633 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHMP2AO43633 KRT8P14-201ENST00000414254 1442 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHMP2AO43633 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 AL645937.2-201ENST00000396808 931 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 BOLA2P3-201ENST00000404566 256 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 AC016694.1-201ENST00000434179 700 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP2AO43633 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP2AO43633 KLF2P4-201ENST00000451959 1225 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 AC104989.1-201ENST00000519711 778 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 AC012508.2-201ENST00000567613 1472 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP2AO43633 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 AL360270.3-201ENST00000609118 1348 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 AL161772.1-201ENST00000610494 4412 ntBASIC17.15■□□□□ 0.34
CHMP2AO43633 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CHMP2AO43633 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP2AO43633 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP2AO43633 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CHMP2AO43633 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP2AO43633 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP2AO43633 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 DBET-201ENST00000630918 3363 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 AL138709.1-201ENST00000614840 1693 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHMP2AO43633 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHMP2AO43633 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AC244107.1-201ENST00000442033 332 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 AL590640.2-201ENST00000457038 527 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 AC119751.2-201ENST00000504529 210 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.14■□□□□ 0.33
CHMP2AO43633 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 KRT90P-201ENST00000549264 1064 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 AC025279.2-201ENST00000569730 653 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHMP2AO43633 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHMP2AO43633 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHMP2AO43633 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms