Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA3F8WFD2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 BRWD1P1-201ENST00000401091 371 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 RPL5P21-201ENST00000404620 815 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 KRT18P25-201ENST00000508931 1278 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AP000812.2-201ENST00000538934 718 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 AC084364.1-201ENST00000551967 1556 ntBASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPA3F8WFD2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AC022494.1-201ENST00000466044 728 ntBASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms