Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZACNP1-201ENST00000612259 710 ntBASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC126755.1-201ENST00000525846 6405 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MST1L-201ENST00000442552 2185 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GOLGA2P4-201ENST00000441462 777 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC026434.2-201ENST00000506094 1078 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL391280.1-201ENST00000506969 1062 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC106820.3-201ENST00000561653 397 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PPY2P-201ENST00000582808 702 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC243960.2-201ENST00000600996 747 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC138466.3-201ENST00000619983 221 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC126365.1-201ENST00000578585 1514 ntBASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.21■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL137783.1-201ENST00000623494 1896 ntBASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CLUHP2-201ENST00000426660 1303 ntBASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.2■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms