Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR1DQ9Y2S0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR1DQ9Y2S0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR1DQ9Y2S0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR1DQ9Y2S0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR1DQ9Y2S0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AL133267.1-201ENST00000398220 340 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 MIR943-201ENST00000401286 94 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 KRT18P64-201ENST00000434946 1219 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 TIMM17BP1-201ENST00000545713 516 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC015911.4-201ENST00000588022 1070 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 LINC01115-203ENST00000606068 577 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AL158211.3-201ENST00000607385 239 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AF228730.6-201ENST00000641497 218 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC084121.3-201ENST00000641716 218 ntBASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.72□□□□□ -0.21
POLR1DQ9Y2S0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 KRT18P28-201ENST00000453838 1332 ntBASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.71□□□□□ -0.21
POLR1DQ9Y2S0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms