Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
MBD1Q9UIS9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC007787.1-201ENST00000588095 1583 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 DBET-201ENST00000630918 3363 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC079178.1-201ENST00000420915 656 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC016700.1-201ENST00000429424 312 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 NKAIN1P1-201ENST00000435754 582 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 COX5BP1-201ENST00000507622 393 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC044849.1-201ENST00000519737 1188 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC244157.2-201ENST00000616239 1006 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC138627.1-207ENST00000641560 1006 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AC022532.1-201ENST00000624563 1728 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD1Q9UIS9 AL109954.1-202ENST00000564051 2148 ntBASIC15.28■□□□□ 0.04
MBD1Q9UIS9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.27■□□□□ 0.04
MBD1Q9UIS9 EIF3FP3-201ENST00000434851 1086 ntBASIC15.27■□□□□ 0.04
MBD1Q9UIS9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 PPY2P-201ENST00000582808 702 ntBASIC15.27■□□□□ 0.04
MBD1Q9UIS9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD1Q9UIS9 AC007663.3-201ENST00000609632 465 ntBASIC15.27■□□□□ 0.04
MBD1Q9UIS9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD1Q9UIS9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MBD1Q9UIS9 AL158070.2-201ENST00000623713 1621 ntBASIC15.27■□□□□ 0.03
MBD1Q9UIS9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MBD1Q9UIS9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD1Q9UIS9 AC023024.2-201ENST00000623561 1993 ntBASIC15.27■□□□□ 0.03
MBD1Q9UIS9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms