Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AL162726.2-201ENST00000438986 1017 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ELK1P1-201ENST00000485699 580 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AC004066.1-201ENST00000502488 802 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SSR4P1-203ENST00000599569 2260 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 DGCR5-201ENST00000399539 862 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 C1QBPP1-201ENST00000400117 770 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 NUS1P3-201ENST00000423502 862 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 AC120045.2-201ENST00000567334 178 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 AC022532.1-201ENST00000624563 1728 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 KRT8P22-201ENST00000562317 1415 ntBASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PARPBPQ9NWS1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.71□□□□□ -0.21
PARPBPQ9NWS1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PARPBPQ9NWS1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PARPBPQ9NWS1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PARPBPQ9NWS1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PARPBPQ9NWS1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms