Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 AC126335.2-201ENST00000623362 4637 ntBASIC13.6□□□□□ -0.23
VRK1Q99986 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.6□□□□□ -0.23
VRK1Q99986 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC007686.3-201ENST00000619017 3487 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 KRT8P37-201ENST00000451609 1420 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 MEP1AP4-201ENST00000423244 1087 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC245100.5-201ENST00000452108 331 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC055876.2-201ENST00000531834 546 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.59□□□□□ -0.23
VRK1Q99986 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK1Q99986 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 AC008494.3-201ENST00000606615 944 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AC074044.1-201ENST00000609673 707 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AC007431.3-201ENST00000623221 587 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 AC138969.3-201ENST00000546612 1459 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AC138932.2-201ENST00000548268 1459 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 AC126755.4-201ENST00000549796 1459 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms