Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AL139400.1-201ENST00000366220 510 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CNN2P2-201ENST00000443536 909 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CNN2P3-201ENST00000450201 906 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 HNRNPUP1-201ENST00000554987 333 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AC025678.2-201ENST00000562061 970 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AC004449.1-201ENST00000564240 433 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AC097359.3-201ENST00000603982 1210 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AL133215.2-201ENST00000609242 977 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 AL136317.3-201ENST00000618497 906 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 BX640514.1-201ENST00000583223 1918 ntBASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTN4IP1Q8WWV3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 REXO1L2P-201ENST00000425429 2069 ntBASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SPDYE17-201ENST00000412399 783 ntBASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms