Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 RARRES2P8-201ENST00000566335 367 ntBASIC14.94□□□□□ -0.02
HIPK4Q8NE63 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC061975.2-201ENST00000581722 295 ntBASIC14.94□□□□□ -0.02
HIPK4Q8NE63 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 AC089987.1-201ENST00000551654 2209 ntBASIC14.94□□□□□ -0.02
HIPK4Q8NE63 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIPK4Q8NE63 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC004899.2-201ENST00000622993 3860 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AL691432.1-201ENST00000596308 1422 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PEG13-201ENST00000631594 5667 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC007967.2-201ENST00000432613 625 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AL138918.1-201ENST00000568306 659 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 AC099522.2-201ENST00000607001 744 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 WASH3P-207ENST00000560956 1394 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 FO538757.1-201ENST00000623083 1397 ntBASIC14.93□□□□□ -0.02
HIPK4Q8NE63 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIPK4Q8NE63 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms