Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SAMD11P1-201ENST00000571429 661 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 REXO1L4P-201ENST00000605109 1937 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CPEB3Q8NE35 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 DGCR5-201ENST00000399539 862 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC004066.1-201ENST00000502488 802 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC124283.3-201ENST00000570869 594 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SPDYE22P-201ENST00000582158 798 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC093813.1-201ENST00000605066 256 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC007787.1-201ENST00000588095 1583 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 AC006058.4-201ENST00000624016 1670 ntBASIC13.39□□□□□ -0.27
CPEB3Q8NE35 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CPEB3Q8NE35 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms