Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.05■□□□□ -0
TRAM1L1Q8N609 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ACE3P-201ENST00000423435 1973 ntBASIC15.04■□□□□ -0
TRAM1L1Q8N609 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 KRT90P-201ENST00000549264 1064 ntBASIC15.04■□□□□ -0
TRAM1L1Q8N609 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 AC244669.2-201ENST00000612320 853 ntBASIC15.04■□□□□ -0
TRAM1L1Q8N609 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ENPP7P14-201ENST00000621765 1040 ntBASIC15.04■□□□□ -0
TRAM1L1Q8N609 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 TCAF2P1-201ENST00000291129 2421 ntBASIC15.04■□□□□ -0
TRAM1L1Q8N609 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAM1L1Q8N609 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAM1L1Q8N609 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PDIA3P1-201ENST00000471856 1510 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 ARSEP1-201ENST00000420443 635 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAM1L1Q8N609 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 AC245100.3-201ENST00000441281 285 ntBASIC15.03■□□□□ -0
TRAM1L1Q8N609 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.03■□□□□ -0
TRAM1L1Q8N609 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms