Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 OR2I1P-209ENST00000641730 5365 ntBASIC14.15□□□□□ -0.14
VRK2Q86Y07 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AL157414.3-201ENST00000624276 1954 ntBASIC14.15□□□□□ -0.14
VRK2Q86Y07 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AC104794.3-201ENST00000566840 1248 ntBASIC14.15□□□□□ -0.14
VRK2Q86Y07 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AC004790.1-201ENST00000612686 536 ntBASIC14.15□□□□□ -0.14
VRK2Q86Y07 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 AC007191.1-201ENST00000623179 2995 ntBASIC14.15□□□□□ -0.14
VRK2Q86Y07 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
VRK2Q86Y07 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
VRK2Q86Y07 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC015656.1-201ENST00000624209 3578 ntBASIC14.14□□□□□ -0.15
VRK2Q86Y07 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC007787.1-201ENST00000588095 1583 ntBASIC14.14□□□□□ -0.15
VRK2Q86Y07 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 LILRP1-201ENST00000444199 1370 ntBASIC14.14□□□□□ -0.15
VRK2Q86Y07 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AL512638.1-201ENST00000457493 794 ntBASIC14.14□□□□□ -0.15
VRK2Q86Y07 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC004066.1-201ENST00000502488 802 ntBASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK2Q86Y07 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
VRK2Q86Y07 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms