Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 AC104306.2-201ENST00000451877 341 ntBASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 MROH4P-201ENST00000431302 1578 ntBASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 INE2-201ENST00000630399 1874 ntBASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 LILRP1-201ENST00000444199 1370 ntBASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 FKBP4P6-201ENST00000457486 1332 ntBASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE3BQ7Z3V4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 AC138035.3-201ENST00000622706 2791 ntBASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 AC104982.3-201ENST00000581995 514 ntBASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 AC244093.1-201ENST00000610837 814 ntBASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 ZACNP1-201ENST00000612259 710 ntBASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE3BQ7Z3V4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
UBE3BQ7Z3V4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBE3BQ7Z3V4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE3BQ7Z3V4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE3BQ7Z3V4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.89■□□□□ 0.61
UBE3BQ7Z3V4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE3BQ7Z3V4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms