Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ALG1L5P-201ENST00000482043 771 ntBASIC13.88□□□□□ -0.19
SHFQ7M4L6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHFQ7M4L6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SHFQ7M4L6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC003101.2-201ENST00000612557 442 ntBASIC13.87□□□□□ -0.19
SHFQ7M4L6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC113367.3-201ENST00000508316 1912 ntBASIC13.87□□□□□ -0.19
SHFQ7M4L6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.87□□□□□ -0.19
SHFQ7M4L6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHFQ7M4L6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms