Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
USP50Q70EL3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USP50Q70EL3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.61■□□□□ 0.41
USP50Q70EL3 KRT18P36-201ENST00000411618 1276 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.61■□□□□ 0.41
USP50Q70EL3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 RN7SL396P-201ENST00000471086 295 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 FAM86KP-201ENST00000509817 987 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.61■□□□□ 0.41
USP50Q70EL3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AHCYP4-201ENST00000419201 1315 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AC012508.2-201ENST00000567613 1472 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 PKD1P1-201ENST00000458669 6805 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 REXO1L4P-201ENST00000605109 1937 ntBASIC17.6■□□□□ 0.41
USP50Q70EL3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.6■□□□□ 0.41
USP50Q70EL3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.6■□□□□ 0.41
USP50Q70EL3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 AP000322.3-201ENST00000608665 388 ntBASIC17.6■□□□□ 0.41
USP50Q70EL3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.6■□□□□ 0.41
USP50Q70EL3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.6■□□□□ 0.41
USP50Q70EL3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP50Q70EL3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USP50Q70EL3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
USP50Q70EL3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USP50Q70EL3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
USP50Q70EL3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
USP50Q70EL3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.59■□□□□ 0.41
USP50Q70EL3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.59■□□□□ 0.41
USP50Q70EL3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.59■□□□□ 0.41
USP50Q70EL3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.59■□□□□ 0.41
USP50Q70EL3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
USP50Q70EL3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
USP50Q70EL3 DDX39AP1-201ENST00000445147 1181 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.59■□□□□ 0.41
USP50Q70EL3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.59■□□□□ 0.41
USP50Q70EL3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 DUX4L50-201ENST00000455245 715 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 DPY19L2P5-201ENST00000456300 331 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.59■□□□□ 0.41
USP50Q70EL3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.59■□□□□ 0.41
USP50Q70EL3 DGAT2L7P-201ENST00000602462 744 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 AC018695.6-201ENST00000614011 534 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms