Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 DNM1P51-201ENST00000558149 522 ntBASIC12.38□□□□□ -0.43
VPS13CQ709C8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13CQ709C8 PHBP15-201ENST00000574228 665 ntBASIC12.38□□□□□ -0.43
VPS13CQ709C8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13CQ709C8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 ACTBP7-201ENST00000418351 1124 ntBASIC12.37□□□□□ -0.43
VPS13CQ709C8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 SIGLEC18P-201ENST00000602271 909 ntBASIC12.37□□□□□ -0.43
VPS13CQ709C8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AC112693.3-201ENST00000624819 1983 ntBASIC12.37□□□□□ -0.43
VPS13CQ709C8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 RPL8P2-201ENST00000430538 502 ntBASIC12.37□□□□□ -0.43
VPS13CQ709C8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13CQ709C8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 AL354861.1-201ENST00000445213 355 ntBASIC12.37□□□□□ -0.43
VPS13CQ709C8 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13CQ709C8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 MIR566-201ENST00000385187 94 ntBASIC12.36□□□□□ -0.43
VPS13CQ709C8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 AC078875.1-201ENST00000431907 724 ntBASIC12.36□□□□□ -0.43
VPS13CQ709C8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 AC093909.3-201ENST00000504783 336 ntBASIC12.36□□□□□ -0.43
VPS13CQ709C8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 BRI3P1-201ENST00000440440 378 ntBASIC12.36□□□□□ -0.43
VPS13CQ709C8 AC024293.1-201ENST00000467930 498 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms