Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 DPM3-202ENST00000368399 517 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 AC022217.1-201ENST00000521069 738 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 AC002472.3-201ENST00000640124 621 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 AC138627.1-207ENST00000641560 1006 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 AC012508.2-201ENST00000567613 1472 ntBASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.63■□□□□ 0.41
SHROOM1Q2M3G4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AC023090.2-201ENST00000625182 2110 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AC013726.1-201ENST00000563747 2285 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 BNIP3P13-201ENST00000599968 566 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 AC138649.2-201ENST00000615886 705 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 OR6D1P-203ENST00000641209 4860 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 LILRP1-201ENST00000444199 1370 ntBASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.62■□□□□ 0.41
SHROOM1Q2M3G4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AC021723.1-201ENST00000486306 515 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AC079328.1-201ENST00000560358 952 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 MIR3619-201ENST00000579667 83 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 AC016629.1-201ENST00000596579 586 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 TUBBP5-203ENST00000508529 1334 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 KRT8P29-201ENST00000420409 1371 ntBASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHROOM1Q2M3G4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms