Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 TLE1P1-201ENST00000422965 589 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 BCRP2-202ENST00000447763 634 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 BCRP6-201ENST00000510112 632 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 BCRP7-201ENST00000511549 544 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 AC023824.1-201ENST00000562945 2975 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 AL596257.1-201ENST00000641463 2694 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 AC011270.2-201ENST00000624293 2550 ntBASIC19.76■□□□□ 0.75
CCDC27Q2M243 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC27Q2M243 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC27Q2M243 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ARSEP1-201ENST00000420443 635 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 U91328.1-201ENST00000437528 223 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 FTH1P14-201ENST00000482930 551 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AL162274.1-201ENST00000617191 1098 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 AL138725.1-201ENST00000407347 1314 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 CLUHP2-201ENST00000426660 1303 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC27Q2M243 CICP14-201ENST00000629111 2732 ntBASIC19.75■□□□□ 0.75
CCDC27Q2M243 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC003102.2-201ENST00000589195 1469 ntBASIC19.74■□□□□ 0.75
CCDC27Q2M243 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 RN7SKP230-201ENST00000365642 335 ntBASIC19.74■□□□□ 0.75
CCDC27Q2M243 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC079776.1-201ENST00000401540 1152 ntBASIC19.74■□□□□ 0.75
CCDC27Q2M243 CD8B2-202ENST00000417670 633 ntBASIC19.74■□□□□ 0.75
CCDC27Q2M243 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 FO681548.1-201ENST00000455617 1132 ntBASIC19.74■□□□□ 0.75
CCDC27Q2M243 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms