Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDR1Q08345 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
DDR1Q08345 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDR1Q08345 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDR1Q08345 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DDR1Q08345 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
DDR1Q08345 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 AC144522.1-201ENST00000625111 1658 ntBASIC18.64■□□□□ 0.57
DDR1Q08345 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 LINC02199-201ENST00000506655 2702 ntBASIC18.64■□□□□ 0.57
DDR1Q08345 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.64■□□□□ 0.57
DDR1Q08345 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.64■□□□□ 0.57
DDR1Q08345 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.64■□□□□ 0.57
DDR1Q08345 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.64■□□□□ 0.57
DDR1Q08345 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.64■□□□□ 0.57
DDR1Q08345 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
DDR1Q08345 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
DDR1Q08345 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 AC010491.1-201ENST00000563101 2797 ntBASIC18.64■□□□□ 0.57
DDR1Q08345 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDR1Q08345 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDR1Q08345 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.63■□□□□ 0.57
DDR1Q08345 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.63■□□□□ 0.57
DDR1Q08345 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
DDR1Q08345 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.63■□□□□ 0.57
DDR1Q08345 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DDR1Q08345 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.63■□□□□ 0.57
DDR1Q08345 MIR557-201ENST00000385239 98 ntBASIC18.63■□□□□ 0.57
DDR1Q08345 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.63■□□□□ 0.57
DDR1Q08345 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.63■□□□□ 0.57
DDR1Q08345 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.63■□□□□ 0.57
DDR1Q08345 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DDR1Q08345 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.63■□□□□ 0.57
DDR1Q08345 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DDR1Q08345 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 AC003102.2-201ENST00000589195 1469 ntBASIC18.63■□□□□ 0.57
DDR1Q08345 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDR1Q08345 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
DDR1Q08345 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.62■□□□□ 0.57
DDR1Q08345 AL583805.1-201ENST00000391389 531 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 AP000358.1-201ENST00000456260 156 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 TMCO5B-205ENST00000530020 894 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.62■□□□□ 0.57
DDR1Q08345 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.62■□□□□ 0.57
DDR1Q08345 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.62■□□□□ 0.57
DDR1Q08345 AC005357.2-202ENST00000590507 1060 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 LINC01783-202ENST00000614408 828 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 BX284668.2-205ENST00000619677 828 ntBASIC18.62■□□□□ 0.57
DDR1Q08345 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.62■□□□□ 0.57
DDR1Q08345 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DDR1Q08345 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDR1Q08345 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
DDR1Q08345 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms