Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KCNQ4P56696 IL9RP3-201ENST00000442856 1674 ntBASIC19.14■□□□□ 0.65
KCNQ4P56696 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNQ4P56696 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNQ4P56696 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KCNQ4P56696 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.13■□□□□ 0.65
KCNQ4P56696 PHBP15-201ENST00000574228 665 ntBASIC19.13■□□□□ 0.65
KCNQ4P56696 AC084781.1-201ENST00000613737 656 ntBASIC19.13■□□□□ 0.65
KCNQ4P56696 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 FRMPD2B-201ENST00000431305 1347 ntBASIC19.13■□□□□ 0.65
KCNQ4P56696 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNQ4P56696 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNQ4P56696 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNQ4P56696 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
KCNQ4P56696 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.12■□□□□ 0.65
KCNQ4P56696 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 AL592076.1-201ENST00000424448 303 ntBASIC19.12■□□□□ 0.65
KCNQ4P56696 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNQ4P56696 AP000358.1-201ENST00000456260 156 ntBASIC19.12■□□□□ 0.65
KCNQ4P56696 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ4P56696 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 AC025262.2-201ENST00000623975 1056 ntBASIC19.12■□□□□ 0.65
KCNQ4P56696 AC005618.3-201ENST00000624928 458 ntBASIC19.12■□□□□ 0.65
KCNQ4P56696 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNQ4P56696 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ4P56696 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KCNQ4P56696 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ4P56696 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNQ4P56696 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ4P56696 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KCNQ4P56696 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KCNQ4P56696 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KCNQ4P56696 MTHFR-217ENST00000641820 1569 ntBASIC19.11■□□□□ 0.65
KCNQ4P56696 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ4P56696 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ4P56696 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 AC024909.3-201ENST00000611513 2257 ntBASIC19.11■□□□□ 0.65
KCNQ4P56696 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ4P56696 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNQ4P56696 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KCNQ4P56696 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNQ4P56696 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ4P56696 AL627422.1-201ENST00000434104 580 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms