Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PSMD4P55036 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
PSMD4P55036 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
PSMD4P55036 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PSMD4P55036 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
PSMD4P55036 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PSMD4P55036 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PSMD4P55036 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PSMD4P55036 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.27□□□□□ -0.12
PSMD4P55036 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PSMD4P55036 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PSMD4P55036 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 AC002472.2-201ENST00000442739 958 ntBASIC14.27□□□□□ -0.13
PSMD4P55036 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.27□□□□□ -0.13
PSMD4P55036 AC004066.1-201ENST00000502488 802 ntBASIC14.27□□□□□ -0.13
PSMD4P55036 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.27□□□□□ -0.13
PSMD4P55036 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.27□□□□□ -0.13
PSMD4P55036 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 AC092364.2-202ENST00000597012 1073 ntBASIC14.27□□□□□ -0.13
PSMD4P55036 AL049840.4-201ENST00000602422 811 ntBASIC14.27□□□□□ -0.13
PSMD4P55036 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PSMD4P55036 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PSMD4P55036 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.27□□□□□ -0.13
PSMD4P55036 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PSMD4P55036 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.26□□□□□ -0.13
PSMD4P55036 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.26□□□□□ -0.13
PSMD4P55036 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 AC012508.2-201ENST00000567613 1472 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PSMD4P55036 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.26□□□□□ -0.13
PSMD4P55036 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 AC104457.1-201ENST00000401024 814 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 AL442647.2-201ENST00000429864 857 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.26□□□□□ -0.13
PSMD4P55036 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.26□□□□□ -0.13
PSMD4P55036 RN7SL204P-201ENST00000582831 262 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.26□□□□□ -0.13
PSMD4P55036 AC093813.1-201ENST00000605066 256 ntBASIC14.26□□□□□ -0.13
PSMD4P55036 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.26□□□□□ -0.13
PSMD4P55036 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
PSMD4P55036 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PSMD4P55036 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.25□□□□□ -0.13
PSMD4P55036 ZBED1P1-201ENST00000502364 1930 ntBASIC14.25□□□□□ -0.13
PSMD4P55036 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.25□□□□□ -0.13
PSMD4P55036 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.25□□□□□ -0.13
PSMD4P55036 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.25□□□□□ -0.13
PSMD4P55036 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PSMD4P55036 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms