Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 MIR1247-201ENST00000408206 136 ntBASIC16.21■□□□□ 0.19
CLCNKBP51801 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCNKBP51801 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCNKBP51801 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCNKBP51801 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCNKBP51801 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCNKBP51801 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CLCNKBP51801 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CLCNKBP51801 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCNKBP51801 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCNKBP51801 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCNKBP51801 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCNKBP51801 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCNKBP51801 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCNKBP51801 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCNKBP51801 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.21■□□□□ 0.18
CLCNKBP51801 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CLCNKBP51801 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCNKBP51801 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCNKBP51801 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCNKBP51801 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CLCNKBP51801 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCNKBP51801 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.2■□□□□ 0.18
CLCNKBP51801 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCNKBP51801 AC006033.1-201ENST00000440505 426 ntBASIC16.2■□□□□ 0.18
CLCNKBP51801 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCNKBP51801 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCNKBP51801 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCNKBP51801 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.2■□□□□ 0.18
CLCNKBP51801 AC104982.3-201ENST00000581995 514 ntBASIC16.2■□□□□ 0.18
CLCNKBP51801 ZACNP1-201ENST00000612259 710 ntBASIC16.2■□□□□ 0.18
CLCNKBP51801 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCNKBP51801 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLCNKBP51801 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCNKBP51801 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCNKBP51801 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCNKBP51801 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCNKBP51801 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCNKBP51801 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 FKBP4P6-201ENST00000457486 1332 ntBASIC16.19■□□□□ 0.18
CLCNKBP51801 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCNKBP51801 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCNKBP51801 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLCNKBP51801 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCNKBP51801 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCNKBP51801 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCNKBP51801 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 REXO1L2P-201ENST00000425429 2069 ntBASIC16.19■□□□□ 0.18
CLCNKBP51801 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 INE2-201ENST00000630399 1874 ntBASIC16.19■□□□□ 0.18
CLCNKBP51801 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCNKBP51801 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms