Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ARCN1P48444 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.3■□□□□ 0.04
ARCN1P48444 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.3■□□□□ 0.04
ARCN1P48444 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.3■□□□□ 0.04
ARCN1P48444 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.3■□□□□ 0.04
ARCN1P48444 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.3■□□□□ 0.04
ARCN1P48444 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARCN1P48444 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.3■□□□□ 0.04
ARCN1P48444 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.3■□□□□ 0.04
ARCN1P48444 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 WASH4P-201ENST00000564273 1246 ntBASIC15.3■□□□□ 0.04
ARCN1P48444 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 SPDYE22P-201ENST00000582158 798 ntBASIC15.3■□□□□ 0.04
ARCN1P48444 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.3■□□□□ 0.04
ARCN1P48444 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 AC008494.3-201ENST00000606615 944 ntBASIC15.3■□□□□ 0.04
ARCN1P48444 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARCN1P48444 AC007191.1-201ENST00000623179 2995 ntBASIC15.3■□□□□ 0.04
ARCN1P48444 AC007431.3-201ENST00000623221 587 ntBASIC15.3■□□□□ 0.04
ARCN1P48444 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARCN1P48444 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARCN1P48444 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARCN1P48444 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.3■□□□□ 0.04
ARCN1P48444 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 AC018442.1-201ENST00000421439 2061 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 AL138799.1-201ENST00000448213 1675 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 HLA-K-203ENST00000430151 1046 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 DFFBP1-201ENST00000433250 979 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.29■□□□□ 0.04
ARCN1P48444 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.29■□□□□ 0.04
ARCN1P48444 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.29■□□□□ 0.04
ARCN1P48444 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.29■□□□□ 0.04
ARCN1P48444 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARCN1P48444 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.29■□□□□ 0.04
ARCN1P48444 AL049840.4-201ENST00000602422 811 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 AC107373.2-201ENST00000607735 490 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 AC025048.6-201ENST00000634326 1161 ntBASIC15.29■□□□□ 0.04
ARCN1P48444 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.29■□□□□ 0.04
ARCN1P48444 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms