Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CEACAM3P40198 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.52□□□□□ -0.41
CEACAM3P40198 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CEACAM3P40198 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CEACAM3P40198 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CEACAM3P40198 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.52□□□□□ -0.41
CEACAM3P40198 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 AL645937.2-201ENST00000396808 931 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 GHSR-202ENST00000427970 912 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.51□□□□□ -0.41
CEACAM3P40198 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.51□□□□□ -0.41
CEACAM3P40198 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.51□□□□□ -0.41
CEACAM3P40198 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 SPDYE22P-201ENST00000582158 798 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
CEACAM3P40198 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 WASH3P-207ENST00000560956 1394 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 AC012508.2-201ENST00000567613 1472 ntBASIC12.51□□□□□ -0.41
CEACAM3P40198 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CEACAM3P40198 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.51□□□□□ -0.41
CEACAM3P40198 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CEACAM3P40198 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.5□□□□□ -0.41
CEACAM3P40198 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CEACAM3P40198 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.5□□□□□ -0.41
CEACAM3P40198 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.5□□□□□ -0.41
CEACAM3P40198 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.5□□□□□ -0.41
CEACAM3P40198 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.5□□□□□ -0.41
CEACAM3P40198 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CEACAM3P40198 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.5□□□□□ -0.41
CEACAM3P40198 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.5□□□□□ -0.41
CEACAM3P40198 SAMD11P1-201ENST00000571429 661 ntBASIC12.5□□□□□ -0.41
CEACAM3P40198 CHCHD2P3-201ENST00000603038 451 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms