Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RFC4P35249 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 AP000356.3-201ENST00000382243 753 ntBASIC18.93■□□□□ 0.62
RFC4P35249 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 AC078875.1-201ENST00000431907 724 ntBASIC18.93■□□□□ 0.62
RFC4P35249 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC4P35249 AP002803.1-201ENST00000528836 498 ntBASIC18.93■□□□□ 0.62
RFC4P35249 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
RFC4P35249 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC4P35249 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 YRDCP1-201ENST00000621419 643 ntBASIC18.93■□□□□ 0.62
RFC4P35249 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.93■□□□□ 0.62
RFC4P35249 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
RFC4P35249 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RFC4P35249 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC4P35249 CAP2P1-201ENST00000557743 1390 ntBASIC18.93■□□□□ 0.62
RFC4P35249 AC006449.5-201ENST00000610658 2098 ntBASIC18.93■□□□□ 0.62
RFC4P35249 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RFC4P35249 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC4P35249 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 RPL8P2-201ENST00000430538 502 ntBASIC18.92■□□□□ 0.62
RFC4P35249 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC4P35249 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 AL031713.1-201ENST00000564813 661 ntBASIC18.92■□□□□ 0.62
RFC4P35249 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.92■□□□□ 0.62
RFC4P35249 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.92■□□□□ 0.62
RFC4P35249 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC4P35249 AL109837.1-201ENST00000603272 613 ntBASIC18.92■□□□□ 0.62
RFC4P35249 AC242376.2-201ENST00000619355 883 ntBASIC18.92■□□□□ 0.62
RFC4P35249 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RFC4P35249 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
RFC4P35249 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RFC4P35249 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC4P35249 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFC4P35249 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFC4P35249 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFC4P35249 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms