Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.2■□□□□ 0.18
CTNNA1P35221 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.2■□□□□ 0.18
CTNNA1P35221 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 AC211486.1-202ENST00000416371 468 ntBASIC16.2■□□□□ 0.18
CTNNA1P35221 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 AC211476.1-201ENST00000503899 468 ntBASIC16.2■□□□□ 0.18
CTNNA1P35221 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.2■□□□□ 0.18
CTNNA1P35221 LINC01115-203ENST00000606068 577 ntBASIC16.2■□□□□ 0.18
CTNNA1P35221 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.2■□□□□ 0.18
CTNNA1P35221 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.2■□□□□ 0.18
CTNNA1P35221 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.2■□□□□ 0.18
CTNNA1P35221 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.2■□□□□ 0.18
CTNNA1P35221 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTNNA1P35221 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTNNA1P35221 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 TOMM22P5-201ENST00000416399 439 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 AC254562.1-201ENST00000417586 456 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 KRT18P43-201ENST00000469825 1281 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 AC069262.1-201ENST00000539058 672 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.19■□□□□ 0.18
CTNNA1P35221 AL512361.1-201ENST00000554200 418 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 AC006504.5-208ENST00000588784 2401 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 AL121723.1-201ENST00000445194 1519 ntBASIC16.19■□□□□ 0.18
CTNNA1P35221 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.19■□□□□ 0.18
CTNNA1P35221 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTNNA1P35221 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CTNNA1P35221 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CTNNA1P35221 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.18■□□□□ 0.18
CTNNA1P35221 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CTNNA1P35221 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 AC015656.1-201ENST00000624209 3578 ntBASIC16.18■□□□□ 0.18
CTNNA1P35221 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CTNNA1P35221 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.18■□□□□ 0.18
CTNNA1P35221 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.18■□□□□ 0.18
CTNNA1P35221 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTNNA1P35221 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CTNNA1P35221 HLA-V-204ENST00000476601 1289 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms