Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 GK-202ENST00000378941 458 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC130P13994 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCDC130P13994 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 KRT43P-201ENST00000434019 910 ntBASIC16.17■□□□□ 0.18
CCDC130P13994 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC130P13994 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC130P13994 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC130P13994 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC130P13994 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC130P13994 SNX29P1-201ENST00000548357 1007 ntBASIC16.17■□□□□ 0.18
CCDC130P13994 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.17■□□□□ 0.18
CCDC130P13994 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC130P13994 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 LRRC59-203ENST00000576448 1531 ntBASIC16.17■□□□□ 0.18
CCDC130P13994 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC130P13994 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC130P13994 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CCDC130P13994 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC130P13994 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 ARSEP1-201ENST00000420443 635 ntBASIC16.16■□□□□ 0.18
CCDC130P13994 EIF3FP3-201ENST00000434851 1086 ntBASIC16.16■□□□□ 0.18
CCDC130P13994 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 AC234783.1-201ENST00000441761 496 ntBASIC16.16■□□□□ 0.18
CCDC130P13994 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC130P13994 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC130P13994 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC130P13994 AC063926.3-201ENST00000624734 5658 ntBASIC16.16■□□□□ 0.18
CCDC130P13994 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC130P13994 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC130P13994 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 PDIA3P1-201ENST00000471856 1510 ntBASIC16.15■□□□□ 0.18
CCDC130P13994 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC130P13994 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC130P13994 ANKRD19P-201ENST00000338192 862 ntBASIC16.15■□□□□ 0.18
CCDC130P13994 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC130P13994 MIR1909-201ENST00000411312 80 ntBASIC16.15■□□□□ 0.18
CCDC130P13994 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms