Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 PDIA3P1-201ENST00000471856 1510 ntBASIC17.95■□□□□ 0.46
TOP1P11387 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.95■□□□□ 0.46
TOP1P11387 SNX29P1-201ENST00000548357 1007 ntBASIC17.95■□□□□ 0.46
TOP1P11387 GNRHR2-203ENST00000581100 1187 ntBASIC17.95■□□□□ 0.46
TOP1P11387 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.95■□□□□ 0.46
TOP1P11387 AL008721.1-201ENST00000609964 604 ntBASIC17.95■□□□□ 0.46
TOP1P11387 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TOP1P11387 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.95■□□□□ 0.46
TOP1P11387 KRT8P35-201ENST00000483942 1338 ntBASIC17.95■□□□□ 0.46
TOP1P11387 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TOP1P11387 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOP1P11387 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 MIR658-201ENST00000385210 100 ntBASIC17.94■□□□□ 0.46
TOP1P11387 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.94■□□□□ 0.46
TOP1P11387 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 ACTBP8-201ENST00000403258 1108 ntBASIC17.94■□□□□ 0.46
TOP1P11387 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TOP1P11387 AC007551.1-201ENST00000457394 519 ntBASIC17.94■□□□□ 0.46
TOP1P11387 FTH1P14-201ENST00000482930 551 ntBASIC17.94■□□□□ 0.46
TOP1P11387 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.94■□□□□ 0.46
TOP1P11387 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 MIR6775-201ENST00000617557 69 ntBASIC17.94■□□□□ 0.46
TOP1P11387 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.94■□□□□ 0.46
TOP1P11387 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.94■□□□□ 0.46
TOP1P11387 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.94■□□□□ 0.46
TOP1P11387 CICP11-201ENST00000434745 2827 ntBASIC17.94■□□□□ 0.46
TOP1P11387 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOP1P11387 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TOP1P11387 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 TMBIM7P-203ENST00000641617 1718 ntBASIC17.93■□□□□ 0.46
TOP1P11387 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TOP1P11387 ANKRD19P-201ENST00000338192 862 ntBASIC17.93■□□□□ 0.46
TOP1P11387 AL139094.1-201ENST00000405549 1188 ntBASIC17.93■□□□□ 0.46
TOP1P11387 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 GHSR-202ENST00000427970 912 ntBASIC17.93■□□□□ 0.46
TOP1P11387 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 AC016694.1-201ENST00000434179 700 ntBASIC17.93■□□□□ 0.46
TOP1P11387 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.93■□□□□ 0.46
TOP1P11387 AC119751.2-201ENST00000504529 210 ntBASIC17.93■□□□□ 0.46
TOP1P11387 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.93■□□□□ 0.46
TOP1P11387 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.93■□□□□ 0.46
TOP1P11387 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP1P11387 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP1P11387 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms