Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 AL118522.1-201ENST00000611368 560 ntBASIC6.61□□□□□ -1.35
USH2AO75445 AC079331.1-201ENST00000623200 1200 ntBASIC6.61□□□□□ -1.35
USH2AO75445 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 CICP11-201ENST00000434745 2827 ntBASIC6.61□□□□□ -1.35
USH2AO75445 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 DPY19L2P5-201ENST00000456300 331 ntBASIC6.61□□□□□ -1.35
USH2AO75445 CDC23-208ENST00000505120 455 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 RARS-210ENST00000626454 177 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 AC105020.1-201ENST00000435356 2205 ntBASIC6.61□□□□□ -1.35
USH2AO75445 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 AL390961.4-201ENST00000623958 2535 ntBASIC6.61□□□□□ -1.35
USH2AO75445 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USH2AO75445 HLA-DMA-202ENST00000395303 1007 ntBASIC6.61□□□□□ -1.35
USH2AO75445 THAP4-203ENST00000402545 833 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 EEF1DP5-201ENST00000431410 772 ntBASIC6.61□□□□□ -1.35
USH2AO75445 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 AC090136.2-201ENST00000517809 420 ntBASIC6.61□□□□□ -1.35
USH2AO75445 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USH2AO75445 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC6.6□□□□□ -1.35
USH2AO75445 FDPSP7-201ENST00000429043 1054 ntBASIC6.6□□□□□ -1.35
USH2AO75445 HMGA1P2-201ENST00000430198 324 ntBASIC6.6□□□□□ -1.35
USH2AO75445 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 CDCA4P4-201ENST00000435216 680 ntBASIC6.6□□□□□ -1.35
USH2AO75445 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 RN7SL121P-201ENST00000584223 273 ntBASIC6.6□□□□□ -1.35
USH2AO75445 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AHCYP4-201ENST00000419201 1315 ntBASIC6.6□□□□□ -1.35
USH2AO75445 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 PHB-210ENST00000511832 1509 ntTSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USH2AO75445 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USH2AO75445 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
USH2AO75445 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms