Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TSPY26P-202ENST00000565928 3884 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CNN2P8-201ENST00000421872 913 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 FAM197Y7-201ENST00000432892 766 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 RPL7P3-201ENST00000441388 714 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 ATP5G2P4-201ENST00000442175 420 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AL590640.2-201ENST00000457038 527 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AP000812.2-201ENST00000538934 718 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 MIR4259-201ENST00000584466 101 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AC017083.2-201ENST00000608069 979 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 AL603764.1-201ENST00000636452 321 ntBASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YJEFN3A6XGL0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 KLF2P4-201ENST00000451959 1225 ntBASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 RN7SL48P-201ENST00000579283 293 ntBASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YJEFN3A6XGL0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms