Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AP001258.2-201ENST00000529891 490 ntBASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AC104982.3-201ENST00000581995 514 ntBASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC090616.6-203ENST00000579186 1945 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 RPSAP36-202ENST00000494591 1261 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 C2orf69P2-201ENST00000562032 1123 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 OR10B1P-201ENST00000601666 907 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AL603764.1-201ENST00000636452 321 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3FA6NER0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3FA6NER0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms