Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AL137783.1-201ENST00000623494 1896 ntBASIC14.51□□□□□ -0.09
LRIT2A6NDA9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.51□□□□□ -0.09
LRIT2A6NDA9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AC011495.1-201ENST00000498085 584 ntBASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 RPSAP52-203ENST00000622976 1023 ntBASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AL358472.5-202ENST00000641448 1267 ntBASIC14.51□□□□□ -0.09
LRIT2A6NDA9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRIT2A6NDA9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 ACTG1P3-201ENST00000431775 1114 ntBASIC14.5□□□□□ -0.09
LRIT2A6NDA9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 AC022137.2-201ENST00000503482 481 ntBASIC14.5□□□□□ -0.09
LRIT2A6NDA9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.5□□□□□ -0.09
LRIT2A6NDA9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms