Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC092384.3-202ENST00000564646 2873 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CD8B2-202ENST00000417670 633 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 RPL13AP20-201ENST00000459725 609 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 MIR4313-201ENST00000580760 101 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC244093.1-201ENST00000610837 814 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC145423.3-201ENST00000615987 467 ntBASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX2IPQ9Y2D8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AHCYP2-201ENST00000430630 1300 ntBASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 AC138951.2-201ENST00000623455 1161 ntBASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms