Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC099521.3-201ENST00000624251 2938 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 CNN2P2-201ENST00000443536 909 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 CNN2P3-201ENST00000450201 906 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AP001160.2-201ENST00000596071 487 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC027612.4-201ENST00000605371 583 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AL136317.3-201ENST00000618497 906 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 ZBED1P1-201ENST00000502364 1930 ntBASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
HHLA3Q9XRX5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AC027612.1-201ENST00000445234 2395 ntBASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 FO393414.2-201ENST00000405153 598 ntBASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HHLA3Q9XRX5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms