Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIP2Q9UDT6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 AC138035.3-201ENST00000622706 2791 ntBASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 PDIA3P1-201ENST00000471856 1510 ntBASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIP2Q9UDT6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLIP2Q9UDT6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 FLJ16779-201ENST00000612722 7638 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 ACKR1-201ENST00000368121 1240 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 BOLA2P3-201ENST00000404566 256 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AL355864.2-201ENST00000447420 863 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AC104989.1-201ENST00000519711 778 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 COX11-210ENST00000639671 696 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AC009090.5-201ENST00000624886 2285 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 CICP24-201ENST00000605464 2705 ntBASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIP2Q9UDT6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms