Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GCM1Q9NP62 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.12□□□□□ -0.31
GCM1Q9NP62 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 SSR4P1-203ENST00000599569 2260 ntBASIC13.11□□□□□ -0.31
GCM1Q9NP62 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 VDAC1P7-201ENST00000462417 847 ntBASIC13.11□□□□□ -0.31
GCM1Q9NP62 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 DRD5P1-201ENST00000456605 1438 ntBASIC13.11□□□□□ -0.31
GCM1Q9NP62 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GCM1Q9NP62 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.11□□□□□ -0.31
GCM1Q9NP62 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC026410.3-201ENST00000514280 936 ntBASIC13.1□□□□□ -0.31
GCM1Q9NP62 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC133539.2-201ENST00000604757 467 ntBASIC13.1□□□□□ -0.31
GCM1Q9NP62 WFDC1-204ENST00000613603 549 ntBASIC13.1□□□□□ -0.31
GCM1Q9NP62 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms