Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC113367.3-201ENST00000508316 1912 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AL080243.2-201ENST00000418783 582 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC025048.3-201ENST00000590609 569 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AL671883.3-201ENST00000603274 991 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 LINC01115-203ENST00000606068 577 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AC005702.4-201ENST00000618393 416 ntBASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDHD3Q9BSH5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 AC012508.2-201ENST00000567613 1472 ntBASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HDHD3Q9BSH5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 Z97205.2-201ENST00000564697 1639 ntBASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 AC018442.1-201ENST00000421439 2061 ntBASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 YBX1P5-201ENST00000509441 847 ntBASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms