Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 KRT19P2-202ENST00000557173 1012 ntBASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC034105.1-201ENST00000563488 319 ntBASIC12.47□□□□□ -0.41
RAB40CQ96S21 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC027307.2-201ENST00000591252 911 ntBASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC120114.3-201ENST00000611923 658 ntBASIC12.47□□□□□ -0.41
RAB40CQ96S21 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 AC005252.3-201ENST00000623855 2258 ntBASIC12.47□□□□□ -0.41
RAB40CQ96S21 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB40CQ96S21 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB40CQ96S21 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AP001267.2-201ENST00000532619 2086 ntBASIC12.46□□□□□ -0.41
RAB40CQ96S21 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AZGP1P1-201ENST00000411909 902 ntBASIC12.46□□□□□ -0.41
RAB40CQ96S21 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB40CQ96S21 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB40CQ96S21 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 AC007787.1-201ENST00000588095 1583 ntBASIC12.46□□□□□ -0.42
RAB40CQ96S21 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB40CQ96S21 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB40CQ96S21 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms