Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC132938.2-201ENST00000579188 680 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC012645.4-201ENST00000610691 1061 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 IGHV3-72-202ENST00000621503 303 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AL591163.1-201ENST00000641757 987 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 MSTO2P-201ENST00000314835 1709 ntBASIC12.7□□□□□ -0.38
GAFA1Q96PS6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.7□□□□□ -0.38
GAFA1Q96PS6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ACTBP8-201ENST00000403258 1108 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 BAATP1-201ENST00000412284 1225 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TTTY23B-201ENST00000442790 549 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AC012441.1-201ENST00000446669 685 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AC022616.1-201ENST00000518688 554 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AL137783.1-201ENST00000623494 1896 ntBASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GAFA1Q96PS6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms