Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
USP47Q96K76 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC21.23■□□□□ 0.99
USP47Q96K76 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP47Q96K76 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP47Q96K76 MESTP3-201ENST00000503460 968 ntBASIC21.22■□□□□ 0.99
USP47Q96K76 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.22■□□□□ 0.99
USP47Q96K76 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 AC138696.2-201ENST00000607376 223 ntBASIC21.22■□□□□ 0.99
USP47Q96K76 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.22■□□□□ 0.99
USP47Q96K76 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
USP47Q96K76 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC21.22■□□□□ 0.99
USP47Q96K76 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
USP47Q96K76 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 AC011840.2-201ENST00000563063 1520 ntBASIC21.21■□□□□ 0.99
USP47Q96K76 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
USP47Q96K76 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP47Q96K76 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP47Q96K76 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.21■□□□□ 0.99
USP47Q96K76 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.21■□□□□ 0.99
USP47Q96K76 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 AP005482.1-201ENST00000563722 1273 ntBASIC21.21■□□□□ 0.99
USP47Q96K76 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.21■□□□□ 0.99
USP47Q96K76 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
USP47Q96K76 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC21.21■□□□□ 0.99
USP47Q96K76 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP47Q96K76 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
USP47Q96K76 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.2■□□□□ 0.98
USP47Q96K76 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.2■□□□□ 0.98
USP47Q96K76 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.2■□□□□ 0.98
USP47Q96K76 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.2■□□□□ 0.98
USP47Q96K76 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.2■□□□□ 0.98
USP47Q96K76 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.2■□□□□ 0.98
USP47Q96K76 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.2■□□□□ 0.98
USP47Q96K76 CD8B2-202ENST00000417670 633 ntBASIC21.2■□□□□ 0.98
USP47Q96K76 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP47Q96K76 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.2■□□□□ 0.98
USP47Q96K76 BNIP3P42-201ENST00000454982 569 ntBASIC21.2■□□□□ 0.98
USP47Q96K76 BNIP3P29-201ENST00000598302 571 ntBASIC21.2■□□□□ 0.98
USP47Q96K76 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC21.2■□□□□ 0.98
USP47Q96K76 AC133552.6-201ENST00000613406 534 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms