Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AC000095.1-201ENST00000603208 874 ntBASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AC074044.1-201ENST00000609673 707 ntBASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AC092135.3-201ENST00000624151 1846 ntBASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 AL360270.3-201ENST00000609118 1348 ntBASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC44A1Q8WWI5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 UPF3AP3-201ENST00000420996 769 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 DNAJB3-201ENST00000446806 729 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TPT1P11-201ENST00000458482 498 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AC023141.5-201ENST00000458585 616 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AC112482.1-201ENST00000492080 688 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AL512361.1-201ENST00000554200 418 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 BEND3P1-201ENST00000421591 1944 ntBASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC44A1Q8WWI5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC44A1Q8WWI5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms