Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 CICP11-201ENST00000434745 2827 ntBASIC15.61■□□□□ 0.09
PTCD2Q8WV60 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCD2Q8WV60 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AC013726.1-201ENST00000563747 2285 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 MTATP6P17-201ENST00000431030 672 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 MEIS3P1-201ENST00000495167 958 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AC118282.1-201ENST00000506408 765 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CTBP2P3-201ENST00000585629 1255 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AL158212.4-201ENST00000624062 1286 ntBASIC15.6■□□□□ 0.09
PTCD2Q8WV60 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCD2Q8WV60 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 ELK1P1-201ENST00000485699 580 ntBASIC15.59■□□□□ 0.09
PTCD2Q8WV60 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 AC055876.2-201ENST00000531834 546 ntBASIC15.59■□□□□ 0.09
PTCD2Q8WV60 TIMM17BP1-201ENST00000545713 516 ntBASIC15.59■□□□□ 0.09
PTCD2Q8WV60 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCD2Q8WV60 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms