Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AGAP7P-201ENST00000582299 2062 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AGAP14-201ENST00000624701 2060 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 INTS4P2-202ENST00000614726 2019 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC134915.1-201ENST00000426461 574 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AL442647.2-201ENST00000429864 857 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 ELK1P1-201ENST00000485699 580 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC140912.1-201ENST00000577171 1054 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AP000845.1-201ENST00000581677 2131 ntBASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPEB3Q8NE35 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AL138799.1-201ENST00000448213 1675 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AC097376.2-205ENST00000610159 5334 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 CRB3P1-201ENST00000449338 276 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AL359711.2-201ENST00000563105 872 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 WASH4P-201ENST00000564273 1246 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 AC120045.2-201ENST00000567334 178 ntBASIC13.4□□□□□ -0.26
CPEB3Q8NE35 TP53TG3HP-202ENST00000569755 579 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms