Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 BOLA2P3-201ENST00000404566 256 ntBASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 TDH-203ENST00000531764 1110 ntBASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 AL359711.2-201ENST00000563105 872 ntBASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 AC233724.13-201ENST00000598383 410 ntBASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC33Q8N5R6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AL162726.2-201ENST00000438986 1017 ntBASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC33Q8N5R6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 AL359258.3-201ENST00000622910 2331 ntBASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC33Q8N5R6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 AL442647.2-201ENST00000429864 857 ntBASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 CTBP2P5-201ENST00000454986 1264 ntBASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms