Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARHGEF39Q8N4T4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 KRT223P-202ENST00000449164 1292 ntBASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AL008721.1-201ENST00000609964 604 ntBASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AC138951.2-201ENST00000623455 1161 ntBASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARHGEF39Q8N4T4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ARHGEF39Q8N4T4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms