Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PPT1-215ENST00000641471 2368 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AL591846.1-201ENST00000451736 433 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AC099548.2-209ENST00000480264 625 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 MESTP3-201ENST00000503460 968 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AC243960.2-201ENST00000600996 747 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AL118558.3-201ENST00000607414 1079 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AL096828.3-201ENST00000615354 462 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AC105917.1-201ENST00000506637 2539 ntBASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBE3BQ7Z3V4 AC020907.1-201ENST00000616460 1350 ntBASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 FTLP10-202ENST00000505798 471 ntBASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 MIR6787-201ENST00000616675 61 ntBASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 AL162727.3-201ENST00000635661 2787 ntBASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE3BQ7Z3V4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.92■□□□□ 0.62
UBE3BQ7Z3V4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms