Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.13□□□□□ -0.15
ZNF550Q7Z398 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 RN7SL692P-201ENST00000464677 288 ntBASIC14.13□□□□□ -0.15
ZNF550Q7Z398 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.13□□□□□ -0.15
ZNF550Q7Z398 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 AL158212.4-201ENST00000624062 1286 ntBASIC14.13□□□□□ -0.15
ZNF550Q7Z398 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 REXO1L2P-201ENST00000425429 2069 ntBASIC14.13□□□□□ -0.15
ZNF550Q7Z398 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
ZNF550Q7Z398 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AC004066.1-201ENST00000502488 802 ntBASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SPDYE18-201ENST00000510091 1050 ntBASIC14.12□□□□□ -0.15
ZNF550Q7Z398 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SRD5A3P1-201ENST00000603021 949 ntBASIC14.12□□□□□ -0.15
ZNF550Q7Z398 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF550Q7Z398 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms