Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC4Q6S5L8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC4Q6S5L8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SHC4Q6S5L8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 AL512638.1-201ENST00000457493 794 ntBASIC17.2■□□□□ 0.34
SHC4Q6S5L8 AC093214.1-201ENST00000511688 1107 ntBASIC17.2■□□□□ 0.34
SHC4Q6S5L8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 RFPL4AP1-201ENST00000530883 850 ntBASIC17.2■□□□□ 0.34
SHC4Q6S5L8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 BRI3BPP1-201ENST00000594224 787 ntBASIC17.2■□□□□ 0.34
SHC4Q6S5L8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC4Q6S5L8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 AC117489.1-201ENST00000625169 3217 ntBASIC17.19■□□□□ 0.34
SHC4Q6S5L8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHC4Q6S5L8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms