Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 GHSR-202ENST00000427970 912 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 RPSAP36-202ENST00000494591 1261 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 RNA5SP423-201ENST00000517127 109 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 DUX4L47-201ENST00000566374 394 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC015818.8-201ENST00000587907 1519 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 MST1L-201ENST00000442552 2185 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 AL360270.3-201ENST00000609118 1348 ntBASIC16.17■□□□□ 0.18
VARS2Q5ST30 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VARS2Q5ST30 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARS2Q5ST30 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AL591846.1-201ENST00000451736 433 ntBASIC16.16■□□□□ 0.18
VARS2Q5ST30 COX5BP1-201ENST00000507622 393 ntBASIC16.16■□□□□ 0.18
VARS2Q5ST30 ZNF767P-206ENST00000513792 565 ntBASIC16.16■□□□□ 0.18
VARS2Q5ST30 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 OR10B1P-201ENST00000601666 907 ntBASIC16.16■□□□□ 0.18
VARS2Q5ST30 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AC005695.3-201ENST00000614522 232 ntBASIC16.16■□□□□ 0.18
VARS2Q5ST30 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
VARS2Q5ST30 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARS2Q5ST30 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms