Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 AL137783.1-201ENST00000623494 1896 ntBASIC16.78■□□□□ 0.28
KCNA1Q09470 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.78■□□□□ 0.28
KCNA1Q09470 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KCNA1Q09470 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.78■□□□□ 0.28
KCNA1Q09470 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 RN7SL752P-201ENST00000463779 287 ntBASIC16.78■□□□□ 0.28
KCNA1Q09470 ENPP7P5-201ENST00000541031 1031 ntBASIC16.78■□□□□ 0.28
KCNA1Q09470 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KCNA1Q09470 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
KCNA1Q09470 AC010319.3-201ENST00000597028 470 ntBASIC16.78■□□□□ 0.28
KCNA1Q09470 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNA1Q09470 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.78■□□□□ 0.28
KCNA1Q09470 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KCNA1Q09470 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KCNA1Q09470 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNA1Q09470 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNA1Q09470 LILRP1-201ENST00000444199 1370 ntBASIC16.77■□□□□ 0.28
KCNA1Q09470 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNA1Q09470 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNA1Q09470 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
KCNA1Q09470 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
KCNA1Q09470 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
KCNA1Q09470 TMEM14DP-201ENST00000422205 345 ntBASIC16.77■□□□□ 0.28
KCNA1Q09470 AL162726.2-201ENST00000438986 1017 ntBASIC16.77■□□□□ 0.28
KCNA1Q09470 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNA1Q09470 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.77■□□□□ 0.28
KCNA1Q09470 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.77■□□□□ 0.28
KCNA1Q09470 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.77■□□□□ 0.28
KCNA1Q09470 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNA1Q09470 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.77■□□□□ 0.28
KCNA1Q09470 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.77■□□□□ 0.28
KCNA1Q09470 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNA1Q09470 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNA1Q09470 IGHV3-72-202ENST00000621503 303 ntBASIC16.77■□□□□ 0.28
KCNA1Q09470 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNA1Q09470 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNA1Q09470 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KCNA1Q09470 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNA1Q09470 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KCNA1Q09470 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNA1Q09470 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNA1Q09470 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNA1Q09470 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KCNA1Q09470 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KCNA1Q09470 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KCNA1Q09470 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KCNA1Q09470 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 AC098614.1-201ENST00000368528 745 ntBASIC16.76■□□□□ 0.27
KCNA1Q09470 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 KLF2P2-201ENST00000416807 1039 ntBASIC16.76■□□□□ 0.27
KCNA1Q09470 COX5BP8-201ENST00000416911 349 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms